Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891456.1_cds_XP_016446253.1_41128
CDS Infomation

[gene=LOC107771409] [db_xref=GeneID:107771409] [protein=alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic] [protein_id=XP_016446253.1] [location=join(32507..32720,33691..33923,34012..34113,34450..34626,34755..35030,35161..35432,35681..35798,36066..36503,36603..36755,37348..37476,37625..37861,38279..38355,38922..39108,39249..39449,40096..40212)] [gbkey=CDS]
Sequence

ATGGCTACTTCGGCAGTCTCAGGAGTGAACTCAATTTCATGCACTACTTCCATTTCAAGC
ATTTCTAGCTTTAACAATTTCAGGAGCAAAAACCCAAATCTTTTGTTGGGGAAAATGAGT
TTTTTATTATATAATTGGAGAAGAAGAAGCTTTTATGTTAGCAATGTGGCTAGTGATCAA
AAACAGAAGATGAAGGATTCTTCCTCTGATGAAGGATTCACATTGGATGTTTTTCAGCCA
GACTCCACATCTGTTTTATCAAGTATAAAGTATCACGCAGAGTTCACACCATCCTTCTCT
CCTGAGAAGTTTGAACTTCCCAAGGCATACTATGCAACTGCAGAGAGCGTTCGTGATATG
CTCATTATAAATTGGAATGCAACATACGACTTATACGAAAAGATGAATGCAAAACAGGCA
TATTATTTGTCTATGGAGTTCCTTCAGGGAAGAGCTTTACTTAATGCAATTGGAAACTTG
GGGCTAACCGGACCTTATGCAGATGCTTTAACTAAGCTCGGATATAGCTTAGAAGATGTA
GCGAGACAGGAACCAGATGCAGCTTTAGGGAATGGAGGTTTAGGACGACTTGCTTCTTGC
TTTCTGGACTCAATGGCGACGCTAAACTACCCTGCATGGGGTTACGGACTTAGATACCGA
TATGGACTTTTCAAACAGCTTATTACAAAAGATGGCCAGGAGGAAGTTGCTGAAAATTGG
CTTGAGATGGGAAATCCATGGGAAATTGTGAGGAATGATATTTCATATCCTGTAAAATTC
TACGGGAAAGTCATTGAAGGAGCTGATGGGAGGAAGGAATGGGTTGGAGGAGAAGATATA
ACTGCTGTTGCCTATGATATCCCAATACCAGGATATAAAACAAAAACAACGATTAACCTT
CGACTGTGGTCCACAAAGCTAGCTGCAGAAGTTTTTGATTTACGTGCTTTTAACGATGGA
GACCATGCCAAAGCATACGAGGCCCAGAAAAAGGCTGAAAAGATTTGCTATATCTTGTAT
CCAGGTGACGATTCACTTGAGGGAAAGACGCTTAGGTTGAAGCAACAATACACACTATGT
TCTGCTTCTCTTCAGGACATTATTGCACGGTTTGAGAGGAGATCAGGGAATACAGTGAAC
TGGGATCAGTTCCCTGAAAAGGTTGCAGTACAGATGAATGACACACATCCAACACTTTGC
ATACCAGAAATATTAAGGGTATTGATAGATGTTAAAGGTTTGAGCTGGAAGCAGGCATGG
GAGATTACTCGAAGAACTGTGGCATACACTAACCACACTGTTCTACCTGAGGCACTGGAG
AAATGGAGTTTGACACTTCTTCGGGAACTGCTTCCTCGGCACGTGGAGATCATAGCAATG
ATAGATGAGGAGCTCTTGCATACTATAGTTGCTGAATATGGTACTGAAGATCTTGACTTG
TTGCAAGAAAAGCTAAACCAAATGAGGATTCTGGAAAATGTTGAAATACCGAGTTCTGTT
CTGGAGCTGCTTATAAAATCCGAGGAAGGCAAAGAACAAGCAGAAGAACAAAAAGAAGAA
GAACAAGAAGAAGGTAAAGATGACAGTAAGGATGAGGAAACTGAGTCTGTAAAAGCAGAA
ACTACGGCCGAAGAGGAGGAAACTGAGGTTAAGAAAGTAGAGGCGGAGGATCCTCAAGCA
AAAATAGAACGGATATTTGGGCCGGATCCAAATGGACAACAAGTGGTTCGCATGGCAAAT
CTATGTGTAGTTGGTGGGCATGCAGTTAATGGTGTTGCTGAGATTCATAGTGAAATAGTT
AAAAAGGAAGTTTTCAACGAATTTTACGAGTTATGGCCAGAGAAATTCCAAAACAAGACA
AATGGAGTTACCCCAAGAAGATGGTTAAGTTTCTGTAACCCAGAGCTGAGTGAAATTATA
ACCAAGTGGACAGGATCTGATGATTGGTTAGTAAACACTGAAAAATTGGCAGAGCTTAGA
AAGTTTGCTGATAATGAAGAACTCCAGTCTGAGTGGAGGAAGGCAAAAAGAAGCAACAAA
ATGAAGATTGTCTCTCTCATTAAAGAAAAAACTGGATACGTGGTCAGTCCTGATGCAATG
TTTGATGTTCAGATCAAGCGCATTCATGAGTATAAGCGGCAACTACTAAATATATTCGGA
ATTGTTTATCGCTATAAGAAGATGAAAGAAATGAGCCCTGAAGAAAGAAAAGAAAAGTTT
GTTCCTCGAATCTGCATATTTGGAGGAAAAGCATTTGCTACATATGTTCAGGCCAAGAGG
ATTGTAAAATTTATCACTGATGTCGGGGCAACAGTGAATCATGATCCTGAGATTGGTGAT
CTTTTGAAGGTTGTCTTTGTCCCTGATTACAATGTCAGTGTGGCAGAAGTGCTAATTCCT
GGTAGTGAGCTGTCCCAGCATATTAGCACTGCTGGTATGGAGGCTAGTGGAACCAGCAAC
ATGAAGTTTGCAATGAATGGCTGCCTCCTCATTGGGACATTAGACGGTGCCAATGTTGAA
ATAAGGGAGGAAGTTGGAGAGGACAATTTCTTTCTCTTTGGAGCTCATGCTCATGAAATT
GCTGGCCTACGTAAGGAAAGAGCCGAGGGAAAGTTTGTACCGGACCCTAGATTTGAAGAA
GTAAAGGCATTTGTTAGGACAGGCGTCTTTGGCCCCTACAACTATGAAGAACTCATTGGA
TCCTTGGAAGGAAATGAAGGCTACGGCCGTGCTGACTATTTTCTTGTAGGAAAGGATTTC
CCTGATTATATAGAGTGCCAAGATAAGGTTGATGAAGCATATCGAGACGAAAAGAAATGG
ACCAAAATGTCGATCTTGAACACAGCTGGATCGTCCAAGTTTAGCAGTGATCGAACAATT
CATCAATACGCAAGAGATATATGGCGGATTCAACCTGTTGAATTACCTTAA

Peptide Sequence

PEP ID

XP_016446253.1
PEP Infomation

PREDICTED: alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic [Nicotiana tabacum]
Sequence

MATSAVSGVNSISCTTSISSISSFNNFRSKNPNLLLGKMSFLLYNWRRRSFYVSNVASDQ
KQKMKDSSSDEGFTLDVFQPDSTSVLSSIKYHAEFTPSFSPEKFELPKAYYATAESVRDM
LIINWNATYDLYEKMNAKQAYYLSMEFLQGRALLNAIGNLGLTGPYADALTKLGYSLEDV
ARQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYRYGLFKQLITKDGQEEVAENW
LEMGNPWEIVRNDISYPVKFYGKVIEGADGRKEWVGGEDITAVAYDIPIPGYKTKTTINL
RLWSTKLAAEVFDLRAFNDGDHAKAYEAQKKAEKICYILYPGDDSLEGKTLRLKQQYTLC
SASLQDIIARFERRSGNTVNWDQFPEKVAVQMNDTHPTLCIPEILRVLIDVKGLSWKQAW
EITRRTVAYTNHTVLPEALEKWSLTLLRELLPRHVEIIAMIDEELLHTIVAEYGTEDLDL
LQEKLNQMRILENVEIPSSVLELLIKSEEGKEQAEEQKEEEQEEGKDDSKDEETESVKAE
TTAEEEETEVKKVEAEDPQAKIERIFGPDPNGQQVVRMANLCVVGGHAVNGVAEIHSEIV
KKEVFNEFYELWPEKFQNKTNGVTPRRWLSFCNPELSEIITKWTGSDDWLVNTEKLAELR
KFADNEELQSEWRKAKRSNKMKIVSLIKEKTGYVVSPDAMFDVQIKRIHEYKRQLLNIFG
IVYRYKKMKEMSPEERKEKFVPRICIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD
LLKVVFVPDYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFAMNGCLLIGTLDGANVE
IREEVGEDNFFLFGAHAHEIAGLRKERAEGKFVPDPRFEEVKAFVRTGVFGPYNYEELIG
SLEGNEGYGRADYFLVGKDFPDYIECQDKVDEAYRDEKKWTKMSILNTAGSSKFSSDRTI
HQYARDIWRIQPVELP

Transcript Sequence

Gene sequence data has not been registered.